Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). The second one is based on Matlab, where the feature selection part (FO-MPA algorithm) was performed. MathSciNet In this paper, each feature selection algorithm were exposed to select the produced feature vector from Inception aiming at selecting only the most relevant features. Therefore, in this paper, we propose a hybrid classification approach of COVID-19. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. However, some of the extracted features by CNN might not be sufficient, which may affect negatively the quality of the classification images. While the second half of the agents perform the following equations. They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. Figure7 shows the most recent published works as in54,55,56,57 and44 on both dataset 1 and dataset 2. Comparison with other previous works using accuracy measure. 95, 5167 (2016). However, it has some limitations that affect its quality. In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in all above stages are repeated until the termination criteria is satisfied. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. Johnson et al.31 applied the flower pollination algorithm (FPA) to select features from CT images of the lung, to detect lung cancers. Meanwhile, the prey moves effectively based on its memory for the previous events to catch its food, as presented in Eq. Google Scholar. It is also noted that both datasets contain a small number of positive COVID-19 images, and up to our knowledge, there is no other sufficient available published dataset for COVID-19. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). Extensive evaluation experiments had been carried out with a collection of two public X-ray images datasets. Technol. Howard, A.G. etal. Syst. Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. Narayanan, S.J., Soundrapandiyan, R., Perumal, B. The focus of this study is to evaluate and examine a set of deep learning transfer learning techniques applied to chest radiograph images for the classification of COVID-19, normal (healthy), and pneumonia. Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. Recombinant: A process in which the genomes of two SARS-CoV-2 variants (that have infected a person at the same time) combine during the viral replication process to form a new variant that is different . COVID-19 tests are currently hard to come by there are simply not enough of them and they cannot be manufactured fast enough, which is causing panic. where CF is the parameter that controls the step size of movement for the predator. In Eq. They compared the BA to PSO, and the comparison outcomes showed that BA had better performance. & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. Slider with three articles shown per slide. The main purpose of Conv. 111, 300323. Wish you all a very happy new year ! Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB . My education and internships have equipped me with strong technical skills in Python, deep learning models, machine learning classification, text classification, and more. Four measures for the proposed method and the compared algorithms are listed. Metric learning Metric learning can create a space in which image features within the. According to the best measure, the FO-MPA performed similarly to the HHO algorithm, followed by SMA, HGSO, and SCA, respectively. In Future of Information and Communication Conference, 604620 (Springer, 2020). They employed partial differential equations for extracting texture features of medical images. The data was collected mainly from retrospective cohorts of pediatric patients from Guangzhou Women and Childrens medical center. In such a case, in order to get the advantage of the power of CNN and also, transfer learning can be applied to minimize the computational costs21,22. et al. and M.A.A.A. For both datasets, the Covid19 images were collected from patients with ages ranging from 40-84 from both genders. wrote the intro, related works and prepare results. Both datasets shared some characteristics regarding the collecting sources. Article For fair comparison, each algorithms was performed (run) 25 times to produce statistically stable results.The results are listed in Tables3 and4. Multimedia Tools Appl. HIGHLIGHTS who: Yuan Jian and Qin Xiao from the Fukuoka University, Japan have published the Article: Research and Application of Fine-Grained Image Classification Based on Small Collar Dataset, in the Journal: (JOURNAL) what: MC-Loss drills down on the channels to effectively navigate the model, focusing on different distinguishing regions and highlighting diverse features. Med. CAS They achieved 98.08 % and 96.51 % of accuracy and F-Score, respectively compared to our approach with 98.77 % and 98.2% for accuracy and F-Score, respectively. 10, 10331039 (2020). In this paper, Inception is applied as a feature extractor, where the input image shape is (229, 229, 3). While no feature selection was applied to select best features or to reduce model complexity. For the special case of \(\delta = 1\), the definition of Eq. The definitions of these measures are as follows: where TP (true positives) refers to the positive COVID-19 images that were correctly labeled by the classifier, while TN (true negatives) is the negative COVID-19 images that were correctly labeled by the classifier. Google Scholar. 6 (left), for dataset 1, it can be seen that our proposed FO-MPA approach outperforms other CNN models like VGGNet, Xception, Inception, Mobilenet, Nasnet, and Resnet. Currently, we witness the severe spread of the pandemic of the new Corona virus, COVID-19, which causes dangerous symptoms to humans and animals, its complications may lead to death. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. where \(R\in [0,1]\) is a random vector drawn from a uniform distribution and \(P=0.5\) is a constant number. In transfer learning, a CNN which was previously trained on a large & diverse image dataset can be applied to perform a specific classification task by23. To obtain The MCA-based model is used to process decomposed images for further classification with efficient storage. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and a swarm-based feature selection algorithm (Marine Predators Algorithm) to select the most relevant features. The results show that, using only 6 epochs for training, the CNNs achieved very high performance on the classification task. In some cases (as exists in this work), the dataset is limited, so it is not sufficient for building & training a CNN. Refresh the page, check Medium 's site status, or find something interesting. More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. arXiv preprint arXiv:2004.05717 (2020). Medical imaging techniques are very important for diagnosing diseases. Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. 40, 2339 (2020). The HGSO also was ranked last. Some people say that the virus of COVID-19 is. For this motivation, we utilize the FC concept with the MPA algorithm to boost the second step of the standard version of the algorithm. Very deep convolutional networks for large-scale image recognition. (9) as follows. Purpose The study aimed at developing an AI . used VGG16 to classify Covid-19 and achieved good results with an accuracy of 86% [ 22 ]. Decis. Can ai help in screening viral and covid-19 pneumonia? They applied the SVM classifier for new MRI images to segment brain tumors, automatically. The MPA starts with the initialization phase and then passing by other three phases with respect to the rational velocity among the prey and the predator. Future Gener. In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. Chong et al.8 proposed an FS model, called Robustness-Driven FS (RDFS) to select futures from lung CT images to classify the patterns of fibrotic interstitial lung diseases. Zhu, H., He, H., Xu, J., Fang, Q. All data used in this paper is available online in the repository, [https://github.com/ieee8023/covid-chestxray-dataset], [https://stanfordmlgroup.github.io/projects/chexnet], [https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia] and [https://www.sirm.org/en/category/articles/covid-19-database/]. MRFGRO: a hybrid meta-heuristic feature selection method for screening COVID-19 using deep features, Detection and analysis of COVID-19 in medical images using deep learning techniques, Cov-caldas: A new COVID-19 chest X-Ray dataset from state of Caldas-Colombia, Deep learning in veterinary medicine, an approach based on CNN to detect pulmonary abnormalities from lateral thoracic radiographs in cats, COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images, ANFIS-Net for automatic detection of COVID-19, A multi-scale gated multi-head attention depthwise separable CNN model for recognizing COVID-19, Validating deep learning inference during chest X-ray classification for COVID-19 screening, Densely attention mechanism based network for COVID-19 detection in chest X-rays, https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/, https://github.com/ieee8023/covid-chestxray-dataset, https://stanfordmlgroup.github.io/projects/chexnet, https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia, https://www.sirm.org/en/category/articles/covid-19-database/, https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing, https://doi.org/10.1016/j.irbm.2019.10.006, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, https://doi.org/10.1016/j.engappai.2020.103662, https://www.sirm.org/category/senza-categoria/covid-19/, https://doi.org/10.1016/j.future.2020.03.055, http://creativecommons.org/licenses/by/4.0/, Skin cancer detection using ensemble of machine learning and deep learning techniques, Plastic pollution induced by the COVID-19: Environmental challenges and outlook, An Inclusive Survey on Marine Predators Algorithm: Variants andApplications, A Multi-strategy Improved Outpost and Differential Evolution Mutation Marine Predators Algorithm for Global Optimization, A light-weight convolutional Neural Network Architecture for classification of COVID-19 chest X-Ray images. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of . Appl. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. The different proposed models will be trained with three-class balanced dataset which consists of 3000 images, 1000 images for each class. Google Research, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, Blog (2017). Jcs: An explainable covid-19 diagnosis system by joint classification and segmentation. The algorithm combines the assessment of image quality, digital image processing and deep learning for segmentation of the lung tissues and their classification. \(\bigotimes\) indicates the process of element-wise multiplications. Artif. Also, some image transformations were applied, such as rotation, horizontal flip, and scaling. Simonyan, K. & Zisserman, A. }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! Med. }\delta (1-\delta ) U_{i}(t-1)+ \frac{1}{3! The GL in the discrete-time form can be modeled as below: where T is the sampling period, and m is the length of the memory terms (memory window). J. Eng. A. In Inception, there are different sizes scales convolutions (conv. 517 PDF Ensemble of Patches for COVID-19 X-Ray Image Classification Thiago Chen, G. Oliveira, Z. Dias Medicine It is obvious that such a combination between deep features and a feature selection algorithm can be efficient in several image classification tasks. Springer Science and Business Media LLC Online. implemented the deep neural networks and classification as well as prepared the related figures and manuscript text. With the help of numerous algorithms in AI, modern COVID-19 cases can be detected and managed in a classified framework. Since its structure consists of some parallel paths, all the paths use padding of 1 pixel to preserve the same height & width for the inputs and the outputs. The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. The whale optimization algorithm. It achieves a Dice score of 0.9923 for segmentation, and classification accuracies of 0. The symbol \(r\in [0,1]\) represents a random number. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. In the meantime, to ensure continued support, we are displaying the site without styles COVID-19 image classification using deep learning: Advances, challenges and opportunities COVID-19 image classification using deep learning: Advances, challenges and opportunities Comput Biol Med. These images have been further used for the classification of COVID-19 and non-COVID-19 images using ResNet50 and AlexNet convolutional neural network (CNN) models. where r is the run numbers. Dhanachandra and Chanu35 proposed a hybrid method of dynamic PSO and fuzzy c-means to segment two types of medical images, MRI and synthetic images. Therefore, reducing the size of the feature from about 51 K as extracted by deep neural networks (Inception) to be 128.5 and 86 in dataset 1 and dataset 2, respectively, after applying FO-MPA algorithm while increasing the general performance can be considered as a good achievement as a machine learning goal. Chollet, F. Xception: Deep learning with depthwise separable convolutions. Also, other recent published works39, who combined a CNN architecture with Weighted Symmetric Uncertainty (WSU) to select optimal features for traffic classification. }, \end{aligned}$$, $$\begin{aligned} D^{\delta }[U(t)]=\frac{1}{T^\delta }\sum _{k=0}^{m} \frac{(-1)^k\Gamma (\delta +1)U(t-kT)}{\Gamma (k+1)\Gamma (\delta -k+1)} \end{aligned}$$, $$\begin{aligned} D^1[U(t)]=U(t+1)-U(t) \end{aligned}$$, $$\begin{aligned} U=Lower+rand_1\times (Upper - Lower ) \end{aligned}$$, $$\begin{aligned} Elite=\left[ \begin{array}{cccc} U_{11}^1&{}U_{12}^1&{}\ldots &{}U_{1d}^1\\ U_{21}^1&{}U_{22}^1&{}\ldots &{}U_{2d}^1\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}^1&{}U_{n2}^1&{}\ldots &{}U_{nd}^1\\ \end{array}\right] , \, U=\left[ \begin{array}{cccc} U_{11}&{}U_{12}&{}\ldots &{}U_{1d}\\ U_{21}&{}U_{22}&{}\ldots &{}U_{2d}\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}&{}U_{n2}&{}\ldots &{}U_{nd}\\ \end{array}\right] , \, \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (Elite_i-R_B\bigotimes U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} U_i+P.R\bigotimes S_i \end{aligned}$$, \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\), $$\begin{aligned} S_i&= {} R_L \bigotimes (Elite_i-R_L\bigotimes U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (R_B \bigotimes Elite_i- U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}} \right) ^{\left(2\frac{t}{t_{max}}\right) } \end{aligned}$$, $$\begin{aligned} S_i&= {} R_L \bigotimes (R_L \bigotimes Elite_i- U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}}\right) ^{\left(2\frac{t}{t_{max}} \right) } \end{aligned}$$, $$\begin{aligned} U_i=\left\{ \begin{array}{ll} U_i+CF [U_{min}+R \bigotimes (U_{max}-U_{min})]\bigotimes W &{} r_5 < FAD \\ U_i+[FAD(1-r)+r](U_{r1}-U_{r2}) &{} r_5 > FAD\\ \end{array}\right. (2) To extract various textural features using the GLCM algorithm. While55 used different CNN structures. We can call this Task 2. Future Gener. Therefore in MPA, for the first third of the total iterations, i.e., \(\frac{1}{3}t_{max}\)). Classification Covid-19 X-Ray Images | by Falah Gatea | Medium 500 Apologies, but something went wrong on our end. Math. COVID-19 Chest X -Ray Image Classification with Neural Network Currently we are suffering from COVID-19, and the situation is very serious. (15) can be reformulated to meet the special case of GL definition of Eq. Accordingly, that reflects on efficient usage of memory, and less resource consumption. Although outbreaks of SARS and MERS had confirmed human to human transmission3, they had not the same spread speed and infection power of the new coronavirus (COVID-19). J. Clin. Google Scholar. However, WOA showed the worst performances in these measures; which means that if it is run in the same conditions several times, the same results will be obtained. Lambin, P. et al. Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. Decaf: A deep convolutional activation feature for generic visual recognition. Appl. The proposed IMF approach is employed to select only relevant and eliminate unnecessary features. The family of coronaviruses is considered serious pathogens for people because they infect respiratory, hepatic, gastrointestinal, and neurologic diseases. . Initialize solutions for the prey and predator. The evaluation outcomes demonstrate that ABC enhanced precision, and also it reduced the size of the features. 35, 1831 (2017). 9, 674 (2020). Chexnet: Radiologist-level pneumonia detection on chest x-rays with deep learning. For instance,\(1\times 1\) conv. Imaging Syst. Tensorflow: Large-scale machine learning on heterogeneous systems, 2015. The optimum path forest (OPF) classifier was applied to classify pulmonary nodules based on CT images. The following stage was to apply Delta variants. An image segmentation approach based on fuzzy c-means and dynamic particle swarm optimization algorithm. Deep Learning Based Image Classification of Lungs Radiography for Detecting COVID-19 using a Deep CNN and ResNet 50 First: prey motion based on FC the motion of the prey of Eq. Appl. The Shearlet transform FS method showed better performances compared to several FS methods. Moreover, we design a weighted supervised loss that assigns higher weight for . Donahue, J. et al. where \(fi_{i}\) represents the importance of feature I, while \(ni_{j}\) refers to the importance of node j. ISSN 2045-2322 (online). Harikumar et al.18 proposed an FS method based on wavelets to classify normality or abnormality of different types of medical images, such as CT, MRI, ultrasound, and mammographic images. The COVID-19 pandemic has been having a severe and catastrophic effect on humankind and is being considered the most crucial health calamity of the century. The proposed segmentation method is capable of dealing with the problem of diffuse lung borders in CXR images of patients with COVID-19 severe or critical. From Fig. It also contributes to minimizing resource consumption which consequently, reduces the processing time. Test the proposed Inception Fractional-order Marine Predators Algorithm (IFM) approach on two publicity available datasets contain a number of positive negative chest X-ray scan images of COVID-19. Highlights COVID-19 CT classification using chest tomography (CT) images. PubMed Imaging 29, 106119 (2009). Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. Table2 depicts the variation in morphology of the image, lighting, structure, black spaces, shape, and zoom level among the same dataset, as well as with the other dataset. However, the proposed IMF approach achieved the best results among the compared algorithms in least time. Propose a novel robust optimizer called Fractional-order Marine Predators Algorithm (FO-MPA) to select efficiently the huge feature vector produced from the CNN. Also, because COVID-19 is a virus, distinguish COVID-19 from common viral . For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. Al-qaness, M. A., Ewees, A. Podlubny, I. In 2019 26th National and 4th International Iranian Conference on Biomedical Engineering (ICBME), 194198 (IEEE, 2019).
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